BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB006F06LP1|AL425565
(509 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1602 985 0.0
>3x_Contig1602
Length = 12694
Score = 985 bits (493), Expect = 0.0
Identities = 502/509 (98%)
Strand = Plus / Plus
Query: 1 ttaaaataagagagamtataaaaaggaaggcgggtgatgcttatacaaaatatgtatatg 60
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 286 ttaaaataagagagactataaaaaggaaggcgggtgatgcttatacaaaatatgtatatg 345
Query: 61 ttacctacgaatgtkgatttgatgaamcatmatttcaaatgctattttcatttgattttg 120
|||||||||||||| ||||||||||| ||| ||||||| |||||||||||||||||||||
Sbjct: 346 ttacctacgaatgtggatttgatgaaccatcatttcaagtgctattttcatttgattttg 405
Query: 121 aacggtttaaatgggaattcgttctcacctatctttaaattcaattacaagttcaagcaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 406 aacggtttaaatgggaattcgttctcacctatctttaaattcaattacaagttcaagcaa 465
Query: 181 aggcccatagtcgttagtctttaagatgtggaattcttctgagaacagacagacatgtct 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 466 aggcccatagtcgttagtctttaagatgtggaattcttctgagaacagacagacatgtct 525
Query: 241 gaaacttgtattgagaactgtttgtagattgagttctaaaatttcgttgaaatgatgaca 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 526 gaaacttgtattgagaactgtttgtagattgagttctaaaatttcgttgaaatgatgaca 585
Query: 301 gtagatatgggcgtwaactctaaatagccttttcaagataggtcttgcgatagagtcttt 360
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 586 gtagatatgggcgtaaactctaaatagccttttcaagataggtcttgcgatagagtcttt 645
Query: 361 gaaatcttttgggaatggggcacctggtttgcttgggaaatatgattcatcatcaaactg 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 646 gaaatcttttgggaatggggcacctggtttgcttgggaaatatgattcatcatcaaactg 705
Query: 421 ctgttgacaccatctgataagataatcgacgtatttaggtgccggtaacgatataggagg 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 706 ctgttgacaccatctgataagataatcgacgtatttaggtgccggtaacgatataggagg 765
Query: 481 tttcmcaggatggacgttccataggtatt 509
|||| ||||||||||||||||||||||||
Sbjct: 766 tttcccaggatggacgttccataggtatt 794
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.712 1.32
Gapped
Lambda K H
1.38 0.712 1.32
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3981
Number of Sequences: 1807
Number of extensions: 3981
Number of successful extensions: 87
Number of sequences better than 1.0e-20: 1
length of query: 509
length of database: 10,358,551
effective HSP length: 16
effective length of query: 493
effective length of database: 10,329,639
effective search space: 5092512027
effective search space used: 5092512027
T: 0
A: 40
X1: 6 (12.0 bits)
X2: 15 (30.0 bits)
S1: 12 (24.5 bits)
S2: 50 (100.4 bits)